Sequence comparison with mixed convex and concave costs

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Sequence Comparison with Mixed Convex and Concave Costs

Recently a number of algorithms have been developed for solving the minimum-weight edit sequence problem with non-linear costs for multiple insertions and deletions. We extend these algorithms to cost functions that are neither convex nor concave, but a mixture of both. We also apply this technique to related dynamic programming algorithms.

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EFFICIENT ALGORITHMS FOR SEQUENCE ANALYSIS WITH CONCAVE AND CONVEX GAP COSTS

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ژورنال

عنوان ژورنال: Journal of Algorithms

سال: 1990

ISSN: 0196-6774

DOI: 10.1016/0196-6774(90)90031-9